A one-dimensional three-state run-and-tumble model with a ‘cell cycle’ published in EPJE

Graphical abstract of the publication. (Image from the article.)
A one-dimensional three-state run-and-tumble model with a ‘cell cycle’
Davide Breoni, Fabian Schwarzendahl, Ralf Blossey, Hartmut Löwen
The European Physics Journal E 45, 83 (2022)
arXiv: 2206.00992
DOI:10.1140/epje/s10189-022-00238-7

We study a one-dimensional three-state run-and-tumble model motivated by the bacterium Caulobacter crescentus which displays a cell cycle between two non-proliferating mobile phases and a proliferating sedentary phase. Our model implements kinetic transitions between the two mobile and one sedentary states described in terms of their number densities, where mobility is allowed with different running speeds in forward and backward direction. We start by analyzing the stationary states of the system and compute the mean and squared-displacements for the distribution of all cells, as well as for the number density of settled cells. The latter displays a surprising super-ballistic scaling t^3 at early times. Including repulsive and attractive interactions between the mobile cell populations and the settled cells, we explore the stability of the system and employ numerical methods to study structure formation in the fully nonlinear system. We find traveling waves of bacteria, whose occurrence is quantified in a non-equilibrium state diagram.

Poster by Davide at the Active Matter and Active Media Summer School 2022, Cargèse, France

Davide presents his poster on the 7th of October in the Institut d’Études Scientifiques of Cargèse. (Photo by Stefania Ketzetzi.)
Davide presented his work at the Active Matter and Active Media Summer School 2022 in Cargèse, France. His poster “A one-dimensional three-state run-and-tumble model with a ‘cell cycle’“, focuses on the modelling of the dynamics and life cycle of the Caulobacter crescentus with Fokker-Planck equations.